To calculate diffusion coefficient from the mean-square-displacement, we need to unwrap the atom coordinates.
https://atomsk.univ-lille.fr/doc/en/mode_unwrap.html
Ref: Atomsk
MDAnalysis Atoms, residules, and segments The data structure in MDAnalysis Source: https://userguide.mdanalysis.org/stable/groups_of_atoms.html Selecting atoms Numerical ranges can be written ...
Changes display defaults # Changes display defaults display resize 600 600 axes location off display projection orthographic color Display Background white color Name {L} silver Set the unitcell ...
Electrolyte Debye-Hückel Theory (only valid for dilute solutions) In electrolyte, the ions are surrounded by clouds of charge opposite their own, due to the attractive forces of the opposing char...
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